Browse of TCMCG017C12643 protein

CDS

Accession Number	TCMCG017C12643
gbkey	CDS
Protein Id	OMO97623.1
Location	join(67690..67728,68075..69000,69249..70133,70531..71038,71161..71331,71994..72320)
GeneID	InterPro:IPR001310
Organism	Corchorus olitorius
locus_tag	COLO4_14500

Protein

Length	951aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01015430.1
Definition	Histidine triad (HIT) protein [Corchorus olitorius]
Locus_tag	COLO4_14500

EGGNOG-MAPPER Annotation

COG_category	L
Description	Transcription factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10863        [VIEW IN KEGG]
EC	3.1.11.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT] 3.1.11.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT] 3.1.12.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006163        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006753        [VIEW IN EMBL-EBI] GO:0006790        [VIEW IN EMBL-EBI] GO:0006793        [VIEW IN EMBL-EBI] GO:0006796        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009117        [VIEW IN EMBL-EBI] GO:0009150        [VIEW IN EMBL-EBI] GO:0009259        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016819        [VIEW IN EMBL-EBI] GO:0019637        [VIEW IN EMBL-EBI] GO:0019693        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044281        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0047627        [VIEW IN EMBL-EBI] GO:0055086        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0072521        [VIEW IN EMBL-EBI] GO:1901135        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAGGCTTCTTCCCGTCCCTGGGTTCGCATCTGCCAGGATACCATTAATAATGGCAAAGCTGGGACAAAGCCACAGTGTTTAAAGAGCGCAACCACTTCATTGAAAGAGGGCAAGAGTGTGTTTATCGATAGATGCAACTTGAACAAAGAGCAGCGGGTGGATTTTGTGAAGCTCGGTGGTCCACAAGTAGAAGTACATGCTGTGGTACTTGACCTCCCTGCCAAGCTTTGTATATCTCGTATAGCTAAACGTACTGGACATGAGGGAAATCTTCAAGGTGGGAAAGCTGCGGCAGTTGTGAATAGAATGTTGCAAAACAAAGAGTTGCCTAAATTGAGTGAAGGGTTCTCTCGAATCATGTTTTGCCAGAGTGAGACTGATGTTCAAACTGCTCTTAACACCTACACTGCACTCGGACCATCAGATACCCTTCCACATGGCTGTTTTGGTCAGAAGGATCCAAATGCCAAAACTCAACTTGGCATAATGAAGTTCTTAAAGCGACCCCATGAAACTAATAGTCAGGATTCTACATGTTCTCAGCTTACTGATGGTAAGGGTCCAGGCAGCAAAGCACAAGAAACTGTTTCATCGTTGTCAGGCACTGCTAGTCAGAAGATAAAGATCAGTGAAGACCCAGCAGCAAATTCTATTAGTCAGAATGATAATGATGTTCCTACTCTGGCATTTCCATCTATTTCAACGGCAGATTTTCGATTTGACCTTGAGAAAGCATCTAATATTATTGTTGAGAAAGTAGAGCAATTCATGGATAAGCTTGGTAATGCCCGGCTTGTTTTAGTGGATTTGACTCAGGGCTCAAAGATTTTGTCCTTGGTTAGGGCTAAAGCTGCACAAAAGAACATTGACTCCAAAAGGTTCTTCACATTTGTAGGAAACATAACTCAACTTCACTCAAAGGGAGGCTTGCACTGTAATGTAATAGCTAATGCTGCCAACTGGCGCCTGAAACCAGGAGGCGGAGGCGTAAATGCTGCAATTTTTGATGCTGGTGGTCCTGCTCTAGAGTCTGCAACCAAAAATCTGGCTAAATCACTTCTTCCAGGGAATGCCCTAGTGGTTCCTCTCCCTTCAACTTCTCCTTTGTATAGCAGGGAAGGGGTGACACATGTTATACATGTTCTTGGACCAAACATGAACCCGCATAGACCGAATTGTCTTGACAATGACTACATCAAAGGCTGCAAAATTCTTGAGGATGCTTACTCATCACTGTTTGAAGGGTTTTTGTCTATAGCTAAGACCCAAGTGAAGTTTCCCAATAGAAGCAGTCAAGGTACTCAGTCAGAGATTTCAATACCAGATAATGAAACTGAGGGTATTCTTAGAAATCATTTTTCACATAGTGAACAAGAGATTGAAAATTGTAAAAACTATGAATCTGACAGCAGTAAGAAGTGCAACAAATCTGAAAATGCAGTTGTGGTTGTTGGTTGCAAAGAACAGGATTTGGTTTCACCATTGTCGGGTGCCACTAGTGATGTGACAAAAGCAGGTGAAAACCAAGCGGCAGGTTCTATTAGTCAGCATGATGATGTTCCTACTCTGGCATTTCCATCTATATCTACAGCAGGTTTCCAATTCGACCTTGAGAAGGCGTCTACTATAATTGTTGATAATGTAGAGGAATTTATGGACAAGCTTGGTAATGCCAGGCTTGTTTTAGTGGACTTGAGTAACAGATCAGAGATTTTGTCTTTGGTAAGGGCTAAAGCTGCACAAAAGAACATCGACTCTAAAAGGTTTTTCACATATGTAGGAGATATAACTCGACTTTACTCAGAGGGAGGTTTGCGCTGCAATGTAATAGCTAATGCTGCAAACTGGCGCCTGAAACCTGGAGGTGGAGGTGTGAATAGTGCAATCTTTGATGCTGGTGGTCCAGATCTAGAGGCTATGACCAAGAATCAGGCCTCATCTCTTCTCCCAGGGGAGGCTGTGGTTGTTCCACTCCCTTCAACTTCTCCCTTGTACACTAGGGAGGGGGTGACCCATGTAATACATGTTCTTGGACCAAACATGAACCCGGAGAGACCAAATTGCCTTGATGGTGACTATATAAAAGGCTGCAAAATTCTTCAAGATGCTTACTCATCACTCTTTGAAAAGTTCCTGTCTATAGCTAACACCCAAGTGAAGATTCCCAAGATAAGCGGTAAAAGTATTCCGTCAGAGCCTTCAGTACCAGAAGAAAAGATTAAGGGAACTCTGACTAAATCCTGGTCCCCGTGGGTTCAAGCTCTATATAAAATTGCAATGCAGCCTGAGAAGTATAAAAATGAAATTCTGGAGGCATCAGATGATGTTGTTGTATTAAATGATATGTACCCAAAGGCAAAAAAGCACCTTTTGGTATTGGCAAGATTTGAAGGACTTGATTGCTTGGCAGATGCACGTAAAGAGCACATTCAGACATTAAAGACATTGCATGCAGTGGGTTTGAAGTGGGCTGAGAAGTTCTTGCATGAAGATGCGTCATTGGTCTTCCGCCTTGGTTATCACTCGGTCCCTTCAATGCGACAACTGCATCTTCATGTTATTAGCCAAGATTTCGACTCCAAACATCTCAAGAATAAGAAGCATTGGAACTCCTTCAATACTGATTTTTTCCGTGATTCTTTGGATGTGATTGAGGAAGTTAACGATATGGGAAAAGCGATATTAGAAGATGAAAAACTGCTGTCAATGGAGTTGCGTTGCCACCGGTGTAGAAGTGTCCACCCTAACATGCCCAGACTAAAATCGCATATAAGCAACTGTCAAGCTCCTTTCCCTGCTTCCCTCAATGGCCGTCTAGTGCTTGTACAAAGTAACTCTGCCTCTGACCCCTAG

Protein:   MQASSRPWVRICQDTINNGKAGTKPQCLKSATTSLKEGKSVFIDRCNLNKEQRVDFVKLGGPQVEVHAVVLDLPAKLCISRIAKRTGHEGNLQGGKAAAVVNRMLQNKELPKLSEGFSRIMFCQSETDVQTALNTYTALGPSDTLPHGCFGQKDPNAKTQLGIMKFLKRPHETNSQDSTCSQLTDGKGPGSKAQETVSSLSGTASQKIKISEDPAANSISQNDNDVPTLAFPSISTADFRFDLEKASNIIVEKVEQFMDKLGNARLVLVDLTQGSKILSLVRAKAAQKNIDSKRFFTFVGNITQLHSKGGLHCNVIANAANWRLKPGGGGVNAAIFDAGGPALESATKNLAKSLLPGNALVVPLPSTSPLYSREGVTHVIHVLGPNMNPHRPNCLDNDYIKGCKILEDAYSSLFEGFLSIAKTQVKFPNRSSQGTQSEISIPDNETEGILRNHFSHSEQEIENCKNYESDSSKKCNKSENAVVVVGCKEQDLVSPLSGATSDVTKAGENQAAGSISQHDDVPTLAFPSISTAGFQFDLEKASTIIVDNVEEFMDKLGNARLVLVDLSNRSEILSLVRAKAAQKNIDSKRFFTYVGDITRLYSEGGLRCNVIANAANWRLKPGGGGVNSAIFDAGGPDLEAMTKNQASSLLPGEAVVVPLPSTSPLYTREGVTHVIHVLGPNMNPERPNCLDGDYIKGCKILQDAYSSLFEKFLSIANTQVKIPKISGKSIPSEPSVPEEKIKGTLTKSWSPWVQALYKIAMQPEKYKNEILEASDDVVVLNDMYPKAKKHLLVLARFEGLDCLADARKEHIQTLKTLHAVGLKWAEKFLHEDASLVFRLGYHSVPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSLDVIEEVNDMGKAILEDEKLLSMELRCHRCRSVHPNMPRLKSHISNCQAPFPASLNGRLVLVQSNSASDP